What is the COBRA Toolbox?

What is the COBRA Toolbox?

The COnstraint-Based Reconstruction and Analysis Toolbox is a MATLAB software suite for quantitative prediction of cellular and multicellular biochemical networks with constraint-based modelling.

How do you install a cobra?

To install COBRA:

1. Click on the “COBRA Installer” link above to download the installer.
2. Locate the file “cobradotnetv4dot1.exe” on your computer and double-click to run the installer.
3. Follow all on-screen instructions to complete the installation.
4. To run COBRA, look for the “COBRA” entry in your “Start” menu.

What is COBRA in bioinformatics?

Abstract. COBrA is a Java-based ontology editor for bio-ontologies that distinguishes itself from other editors by supporting the linking of concepts between two ontologies, and providing sophisticated analysis and verification functions. This note presents COBrA, an ontology editor and mapping tool.

What are persistent flags in Cobra?

January 4, 2019. If you are using cobra cmd line library for golang applications and it’s PersistentFlags and if you have a use case where you are adding same kind of flag in multiple places. You might burn your fingers in that case, if you keep adding it in multiple sub-commands without giving it a second thought.

What is Cobra used for?

The Consolidated Omnibus Budget Reconciliation Act (COBRA) gives workers and their families who lose their health benefits the right to choose to continue group health benefits provided by their group health plan for limited periods of time under certain circumstances such as voluntary or involuntary job loss.

What is Cobra code?

Cobra is a discontinued general-purpose, object-oriented programming language. Cobra is designed by Charles Esterbrook, and runs on the Microsoft . NET and Mono platforms. It is strongly influenced by Python, C#, Eiffel, Objective-C, and other programming languages. It supports both static and dynamic typing.

What is a Cobra Flag?

A flag is a way to modify the behavior of a command. Cobra supports fully POSIX-compliant flags as well as the Go flag package. A Cobra command can define flags that persist through to children commands and flags that are only available to that command. In the example above, ‘port’ is the flag.

What is a persistent flag?

A flag can be ‘persistent’ meaning that this flag will be available to the. command it’s assigned to as well as every command under that command. For.

What is Cobra MATLAB?

COBRA is a Matlab toolbox I developed for feature selection based on mutual information. At each round, it solves a Semidefinte programing problem to select the optimal feature set. The details of this program can be found in “A Semidefinite Programming Based Search Strategy for Feature Selection with Mutual Information Measure”.

What does Cobra stand for?

The COBRA Toolbox The COnstraint-Based Reconstruction and Analysis (COBRA) Toolbox written in MATLAB. COBRApy COBRApy is a package for constraint-based modeling of biological networks written in Python.

What is constraint-based reconstruction and analysis toolbox?

The COnstraint-Based Reconstruction and Analysis Toolbox is a MATLAB software suite for quantitative prediction of cellular and multicellular biochemical networks with constraint-based modelling.

Who is the current lead developer of opencobra?

The openCOBRA project is currently lead by Ronan Fleming from the National University of Ireland, Galway (NUIG), Nikolaus Sonnenschein from the Technical University of Denmark, and Nathan Lewis from UCSD. The COBRA Toolbox (2016-2017). How to cite an openCOBRA package?